CDS

Accession Number TCMCG081C04242
gbkey CDS
Protein Id XP_002279611.3
Location complement(join(2681462..2681551,2681804..2681872,2681954..2682020,2682988..2683055,2683215..2683325,2683538..2683595,2683734..2683770,2684920..2685013,2686191..2686256,2686362..2686426,2686564..2686708,2686870..2686935,2687316..2687465,2689101..2689170,2690260..2690336,2690435..2690503,2690620..2690703,2697355..2697401,2698333..2698476,2698564..2698762,2702931..2703059,2706035..2706118,2706317..2706430,2707467..2707574,2707642..2707737,2715369..2715437,2715729..2715830,2715969..2716064,2718258..2718341,2718755..2718872,2718940..2719013,2719708..2719869,2720043..2720287,2724103..2724253,2725303..2725419,2726509..2726616,2726772..2726871,2727107..2727183,2727903..2727968))
Gene LOC100257163
GeneID 100257163
Organism Vitis vinifera

Protein

Length 1291aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA33471
db_source XM_002279575.4
Definition PREDICTED: Niemann-Pick C1 protein isoform X2 [Vitis vinifera]

EGGNOG-MAPPER Annotation

COG_category I
Description Niemann-Pick C1
KEGG_TC 2.A.6.6
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko02000        [VIEW IN KEGG]
KEGG_ko ko:K12385        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04142        [VIEW IN KEGG]
ko04979        [VIEW IN KEGG]
map04142        [VIEW IN KEGG]
map04979        [VIEW IN KEGG]
GOs GO:0000323        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005496        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005576        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005635        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005764        [VIEW IN EMBL-EBI]
GO:0005773        [VIEW IN EMBL-EBI]
GO:0005783        [VIEW IN EMBL-EBI]
GO:0005886        [VIEW IN EMBL-EBI]
GO:0005887        [VIEW IN EMBL-EBI]
GO:0006082        [VIEW IN EMBL-EBI]
GO:0006464        [VIEW IN EMBL-EBI]
GO:0006486        [VIEW IN EMBL-EBI]
GO:0006629        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006869        [VIEW IN EMBL-EBI]
GO:0007034        [VIEW IN EMBL-EBI]
GO:0007041        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0008202        [VIEW IN EMBL-EBI]
GO:0008206        [VIEW IN EMBL-EBI]
GO:0008289        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009100        [VIEW IN EMBL-EBI]
GO:0009101        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010876        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0015485        [VIEW IN EMBL-EBI]
GO:0015850        [VIEW IN EMBL-EBI]
GO:0015918        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016021        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0019752        [VIEW IN EMBL-EBI]
GO:0030301        [VIEW IN EMBL-EBI]
GO:0031224        [VIEW IN EMBL-EBI]
GO:0031226        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0032787        [VIEW IN EMBL-EBI]
GO:0032934        [VIEW IN EMBL-EBI]
GO:0033036        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0036094        [VIEW IN EMBL-EBI]
GO:0036211        [VIEW IN EMBL-EBI]
GO:0042592        [VIEW IN EMBL-EBI]
GO:0042632        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043178        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0043413        [VIEW IN EMBL-EBI]
GO:0043436        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044281        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044428        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044459        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0048471        [VIEW IN EMBL-EBI]
GO:0048878        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0055088        [VIEW IN EMBL-EBI]
GO:0055092        [VIEW IN EMBL-EBI]
GO:0065007        [VIEW IN EMBL-EBI]
GO:0065008        [VIEW IN EMBL-EBI]
GO:0070085        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0071944        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901135        [VIEW IN EMBL-EBI]
GO:1901137        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]
GO:1901615        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGATTTTCTCGGCGAGAAACATGGTGTTCTCGTTTCGTCTTCTCGCCGCCCTTTCGCTGTTACAGGTATTAATTTTTGCATCTTTACTCGGAGCAGAGAAGACTGATTCACAGTTCCTTTTGTTTCCCAATGCCACGTCTGGGGAAAGGCATTCCCCAGAATACTGTGCAATGTACGACATCTGTGGGGAGCGCAGTGATGGTAAAGTTTTGAATTGTCCATATGGGACCCCTGCTGTGAAGCCTGATGAGTTTCTTTCTGCAAAAATCCAAAGCTTATGTCCCATGATAAGTGGAAATGTTTGCTGTACGGAGGCTCAGTTTGATACTCTGCGGGCACAAGTTCAACAAGCAATCCCTTTTCTTGTGGGCTGCCCAGCATGCTTGAGGAACTTCTTAAATCTTTTCTGTGAGCTTTCTTGCTCCCCGAATCAAAGTCTGTTCATCAATGTGACTTCCATCGCCAAGGGAAATTGCAGTTCGACTGTGGATGGCATTGATTTTTATGTAAGTGATGCTTTTGGGGAAGGGCTATATAACTCCTGCAAGGATGTAAAGTTTGGGACTATGAATACAAGGGCAATACAATTTATTGGTGCAGGTGCTCGAAATTTTAAAGAATGGTTTGCATTTATTGGCCAGCAAGCTGACCTTGGAATGCCTGGTTCACCTTATGCTATTAATTTTAAGTCAAGACCTGAATCATCTGGAATGGAGCTTATGAATGTGTCTATTTATTCATGTGGTGACACTTCACTAGGATGCTCTTGTGGTGATTGCCCTTCATCTCCAGTGTGTTCTGACTATGAACCTCCTTCTCCACAACAAAAGGATGCCTGCTCGATTAGCCTTGGGTCTGTGAAGGTCAAATGCATTGAATTTTCATTGGCAATCCTATATATTGTGTTGGTTTCTGCATTTTTCGGGTGGGGTTTGTTTCATCGGACAAGAGAAAGGAGGAGGATACCTGCATCAAACATGAAACCGTTGTTGAACTTTGAGGATGAGAAGCTCACTACTCTGAAGGTGCATGAGATGGTTCCTCAAGAGACAAATGTACAACTTTCTGCTGTTCAAGGATACATGTCGAGTTTCTACAGGCAATATGGAACATGGGTTGCCAAAAATCCCAGCCTTGTGCTGTGTATGTCGTTGGCAGTTGTTCTTATACTTTGTTTAGGTCTAATCCGTTTCAAGGTGGAGACACGGCCTGAGAAGCTGTGGGTAGGTCCTGGGAGTCGGGCAGCAGAAGAGAAAAATTTCTTTGACAGCCACCTAGCCCCTTTTTACAGAATTGAACAGCTCATATTGGCCACCATGCCAGATATCAAGAGTGGCAAGTCTTCCAGTATTGTATCAGATGATAATATCCAGTTACTATTTGAAATACAAAAGAAGGTTGATGGACTTCGTGCAAATTATTCTGGCTCAGTGGTGTCTCTAACTGATATTTGTTTGAAGCCTATGGGACAGGATTGTGCTACTCAAAGTGTTCTGCAGTATTTTAAAATGGACCCTGAAAATTATTATGGCTATGGAGGAGTTCAACATGTTGAGTACTGCTTTCAGCATTACACTACTGCAGACACTTGCATGAGTGCTTTTAAGGCTCCACTTGATCCAAGCACTGCCCTGGGGGGATTTTCTGGGAACAATTATACTGAGGCTTCTGCATTTATTGTGACCTACCCAGTAAATAATGCAATTGGTGGAGCAGGCAATGAAAATGGGAAAGCTGTGGCCTGGGAGAAGGCTTTTGTTCAGTTAGTGAAGGATGAGCTGCTGTCAATGGTGCAGTCTAGAAATCTCACTCTTTCATTTTCATCTGAAAGCTCAATTGAGGAAGAATTGAAAAGAGAAAGTACAGCAGATGTTATAACAATATCAATAAGCTATCTTGTAATGTTTGCGTACATATCAATAACCTTGGGAGATGTGTCTCGTTTATCTTCTTTCTATGTTTCATCCAAGGTATTGCTTGGTCTTTCAGGAGTTATTGTTGTCATGCTATCTGTCCTTGGATCTGTAGGATTTTTCAGTGCCATCGGAGTAAAATCTACGTTAATCATAATGGAAGTCATTCCTTTCCTTGTTTTGGCTGTTGGAGTCGATAACATGTGTATACTGGTACATGCTGTGAAGCGACAATCCTTAGATTTGCCTCTAGAAGGACGAATAAGTAATGCACTTGTTGAAGTTGGTCCGTCCATAACACTAGCTAGTTTGTCTGAAGTTTTGGCGTTTGCAGTTGGAAGTTTCATTCCTATGCCGGCATGCCGTGTTTTCTCGATGTTTGCAGCTTTGGCTGTTCTACTGGACTTCCTTCTGCAAGTTACTGCTTTTGTTGCCTTGATAGTGTTTGACTTTATGAGAGCTGAGGATAACAGGATCGACTGCTTCCCATGTATAAAAATTCCATCATCTTCTGTGGAATCTGATGAAGGCATCAATCAGAGAAAGCCAGGAGGATTGCTGGCTTGGTATATGCAGGAAGTTCATGCTCCCATTCTTGGTATTTGGGGAGTTAAAATATTCGTCATTGCTGCTTTTTTTGCTTTCACATTAGCAAGCATTGCATTGTGTACAAGAATTGAACCTGGTTTAGAGCAACAAATTGTCCTTCCTCGGGATTCATATCTTCAGGGATATTTCAATAATGTTTCAGAGTATCTCAGAATTGGACCTCCATTATACTTTGTTGTTAAAGACTATAATTACAGCTCGGATTCCAGACACACAAATCAGTTGTGCTCCATCAACCAGTGTGACTCAAACTCTCTTTTGAACGAGATATCAAGAGCATCTTTGGTGCCAGAATCAAGCTACATCGCTAAGCCAGCTGCCTCCTGGCTTGATGACTTTTTAGTATGGATGTCACCAGAAGCCTTTGGTTGCTGTAGAAAGTTTGTAAATGGTAGTTATTGCCCACCAGATGATCAGCCTCCTTGCTGTTCTCCTGATGAAGGTTATTGTGACCTAGGAGGGGTGTGCAAAGACTGTACAACGTGCTTCCGTCACTCAGATTTGAATAGTGGCCGGCCATCTACAGAACAATTCAGGGAGAAGCTTCCATGGTTCCTTAATGCATTGCCCTCTGCTGATTGTGCAAAGGGTGGCCATGGAGCTTATACTAGCAGTGTTGATCTGAATGGTTATGAAAGCAGTGTTATACAAGCATCAGAGTTCCGTACATATCACACACCACTAAACAAACAGGTTGACTACGTTAATTCAATGAGAGCTGCAAGAGAATTCAGCTCAAGGGTTTCTGATGCCTTGAAGATCCAAATCTTTCCATATTCAGTGTTCTACATGTTCTTTGAGCAATATTTGGATATCTGGAGGACAGCTTTAATCAACATTGCTATAGCACTTGGTGCTGTATTTATTGTTTGTCTAGTTATCACTTCCAGTGTATGGAGTTCAGCAATTATTTTACTTGTTTTGGCAATGATTATTGTGGATCTCATGGGTGTGATGGCATGTCTGGATATCCAACTGAATGCAGTCTCTGTTGTAAACCTTATAATGTCAATTGGGATTGCTGTTGAGTTCTGTGTCCATATTTCACATGCCTTTTCGGTAAGCCAAGGTGATCGGAACCAACGAGCAAAGCTGGCTCTGGGTACCATGGGAGCCTCTGTCTTCAGTGGAATTACGCTTACAAAGTTAGTCGGGGTTATTGTCCTCTGCTTCTCAAAATCAGAAATTTTTGTGGTTTATTACTTCCAAATGTATCTGGCATTGGTTCTTATTGGTTTCTTGCATGGGCTTGTATTTTTACCGGTGATACTAAGCATGATTGGTCCACCATCAATGCATGTACCCATAAAACAGCAAGAAGATGAGCCCTCTTCGTCAGCATTATTGGGCTAA
Protein:  
MIFSARNMVFSFRLLAALSLLQVLIFASLLGAEKTDSQFLLFPNATSGERHSPEYCAMYDICGERSDGKVLNCPYGTPAVKPDEFLSAKIQSLCPMISGNVCCTEAQFDTLRAQVQQAIPFLVGCPACLRNFLNLFCELSCSPNQSLFINVTSIAKGNCSSTVDGIDFYVSDAFGEGLYNSCKDVKFGTMNTRAIQFIGAGARNFKEWFAFIGQQADLGMPGSPYAINFKSRPESSGMELMNVSIYSCGDTSLGCSCGDCPSSPVCSDYEPPSPQQKDACSISLGSVKVKCIEFSLAILYIVLVSAFFGWGLFHRTRERRRIPASNMKPLLNFEDEKLTTLKVHEMVPQETNVQLSAVQGYMSSFYRQYGTWVAKNPSLVLCMSLAVVLILCLGLIRFKVETRPEKLWVGPGSRAAEEKNFFDSHLAPFYRIEQLILATMPDIKSGKSSSIVSDDNIQLLFEIQKKVDGLRANYSGSVVSLTDICLKPMGQDCATQSVLQYFKMDPENYYGYGGVQHVEYCFQHYTTADTCMSAFKAPLDPSTALGGFSGNNYTEASAFIVTYPVNNAIGGAGNENGKAVAWEKAFVQLVKDELLSMVQSRNLTLSFSSESSIEEELKRESTADVITISISYLVMFAYISITLGDVSRLSSFYVSSKVLLGLSGVIVVMLSVLGSVGFFSAIGVKSTLIIMEVIPFLVLAVGVDNMCILVHAVKRQSLDLPLEGRISNALVEVGPSITLASLSEVLAFAVGSFIPMPACRVFSMFAALAVLLDFLLQVTAFVALIVFDFMRAEDNRIDCFPCIKIPSSSVESDEGINQRKPGGLLAWYMQEVHAPILGIWGVKIFVIAAFFAFTLASIALCTRIEPGLEQQIVLPRDSYLQGYFNNVSEYLRIGPPLYFVVKDYNYSSDSRHTNQLCSINQCDSNSLLNEISRASLVPESSYIAKPAASWLDDFLVWMSPEAFGCCRKFVNGSYCPPDDQPPCCSPDEGYCDLGGVCKDCTTCFRHSDLNSGRPSTEQFREKLPWFLNALPSADCAKGGHGAYTSSVDLNGYESSVIQASEFRTYHTPLNKQVDYVNSMRAAREFSSRVSDALKIQIFPYSVFYMFFEQYLDIWRTALINIAIALGAVFIVCLVITSSVWSSAIILLVLAMIIVDLMGVMACLDIQLNAVSVVNLIMSIGIAVEFCVHISHAFSVSQGDRNQRAKLALGTMGASVFSGITLTKLVGVIVLCFSKSEIFVVYYFQMYLALVLIGFLHGLVFLPVILSMIGPPSMHVPIKQQEDEPSSSALLG